rs26892337 SNP Detail

Summary

• ID
  rs26892337
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:67145415 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAAG AGTCCAAGGT GAGAACCCTC
  W
  GTTGAGACTT TCATGCATGG AACTG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss37172559	NES08484451	PERLEGEN	MM_PANEL2	f	SNP	T		A	T	T	T	T	T	T		A	T	T		T
ss132326607	ENSMUSSNP6213677	ENSEMBL	ENSEMBL_Sanger	f	SNP		A					T
ss323719231	CHEV_11_67068091	CHEVERUD	SCREENING_POP	f	SNP										A				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs26892337					SNP	T	A	A	T	T	T	T	T	T	A	A	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37172559	NES08484451	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67145415 () rs orientation: forward

Symbol	Name	Function Class
Myh4	myosin, heavy polypeptide 4, skeletal muscle	within coordinates
Rr449442	regulatory region 449442	603 bp distal
Tssr3528	transcription start site region 3528	144 bp upstream
Tssr3529	transcription start site region 3529	200 bp upstream
Tssr102201	transcription start site region 102201	1071 bp downstream
Tssr102202	transcription start site region 102202	582 bp downstream
Tssr102203	transcription start site region 102203	519 bp downstream
Tssr102204	transcription start site region 102204	123 bp downstream
Tssr102205	transcription start site region 102205	84 bp upstream
Tssr102206	transcription start site region 102206	188 bp upstream
Tssr102207	transcription start site region 102207	832 bp upstream
Tssr102208	transcription start site region 102208	1002 bp upstream
Tssr102209	transcription start site region 102209	1037 bp upstream
Tssr102210	transcription start site region 102210	1055 bp upstream
Tssr102211	transcription start site region 102211	1065 bp upstream
Tssr102212	transcription start site region 102212	1087 bp upstream
Tssr102213	transcription start site region 102213	1239 bp upstream
Tssr102214	transcription start site region 102214	1595 bp upstream
Tssr102215	transcription start site region 102215	1609 bp upstream
Tssr102216	transcription start site region 102216	1653 bp upstream
Tssr102217	transcription start site region 102217	1807 bp upstream
Tssr108534	transcription start site region 108534	1985 bp upstream
Tssr108535	transcription start site region 108535	1879 bp upstream
Tssr108536	transcription start site region 108536	535 bp upstream
Tssr108537	transcription start site region 108537	514 bp upstream
Tssr108538	transcription start site region 108538	4 bp upstream
Tssr108539	transcription start site region 108539	177 bp downstream
Tssr108540	transcription start site region 108540	237 bp downstream
Tssr108541	transcription start site region 108541	846 bp downstream
Tssr108542	transcription start site region 108542	1007 bp downstream
Tssr108543	transcription start site region 108543	1122 bp downstream
Tssr108544	transcription start site region 108544	1705 bp downstream