rs26897564 SNP Detail

Summary

• ID
  rs26897564
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:3582897 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATGGGTAC GAAACAGTGA
  GCCCTACAGG ATTTGAGAAC ACAGCCAACA CTGGAATATC CTCTCTGTTT AGACCTAGCA
  CATAGAAATA TAGAAATGGT TTCTTGTCCC ATGTTGGAGG CCCATGTATG CTTTGCTCAT
  TTTCTTTTCT TTTTTTTTTT CAGAGTTGCC ACCACGTGCA CTTTATTGAA TCCACTGTGG
  R
  CAGATATGTG AAGGTAACAT TTGCATATGC ATAGGGTAAA GGGTCTAGGC TTCAGCCTGG
  GGTGGGGGAT GGGGTGGGGG GTGGGGCAGA TGTGGACCTT GGAGCACAGG GCAGCTAGAA
  TCCAGAATGG GGTGTTCTTT GTGAAAACGA CTGAAAGACT ACCACAGAGG TGGTAGAGAA
  AATAATGATG CAGATAATGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss37111993	NES08502746	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs26897564					SNP	A	A	A	A	A	A	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37111993	NES08502746	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:3582897 () rs orientation: forward

Symbol	Name	Function Class
Gm11951	predicted gene 11951	115 bp downstream
Tssr106495	transcription start site region 106495	564 bp downstream