rs26908234 SNP Detail

Summary

• ID
  rs26908234
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:69690120 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGAGTGAAC TCTAGAGGGG GAGTTCTGGA CTAGGCCCTA
  GACAAGCCAA AACAGGAAGG ACAGAGTCCT GGGTGTAAGC CATGTGTGTA GCAAAGGATG
  R
  TTATGTGCTG AGGGTGTCCC CAGTCGTCCA GGCCACTCAG CCTCATTGTC CTCTTACCGA
  GCTGTACAAT AGCCCCTCAG CGTTCATGGC CATGTAGTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	LG/J	PWD/PhJ	SM/J
ss37166868	NES08480797	PERLEGEN	MM_PANEL2	f	SNP	A		G
ss323731584	CHEV_11_69612796	CHEVERUD	SCREENING_POP	f	SNP		A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	LG/J	PWD/PhJ	SM/J
rs26908234					SNP	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37166868	NES08480797	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:69690120 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3148	CpG island 3148	850 bp proximal
Fgf11	fibroblast growth factor 11	within coordinates
Tssr102534	transcription start site region 102534	1480 bp upstream
Tssr108839	transcription start site region 108839	1911 bp upstream
Tssr108840	transcription start site region 108840	643 bp downstream