rs26908337 SNP Detail

Summary

• ID
  rs26908337
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:69557114 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGACTCAGAC ACCTCAGCTT TAGCAACCCA CTCAAGCCAT
  TGGTTTTCAC AATTAGGCTG TGATTGGCAG TGACGTTCTC AGTGGGCGGT ACAAAGCCTT
  R
  GTTACCTCGT GAGAATGAGG CAGCTGACTC ACACGGAACT TACCTAAGCA AAACTTGCTC
  TACTTGGGAG CTTACAATGC AGCAGAGAAA TGGGAAGCC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss37166974	NES08483014	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G		A	G	G	A
ss323730979	CHEV_11_69479790	CHEVERUD	SCREENING_POP	f	SNP										G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs26908337					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37166974	NES08483014	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:69557114 () rs orientation: forward

Symbol	Name	Function Class
Cd68	CD68 antigen	135 bp upstream
Eif4a1	eukaryotic translation initiation factor 4A1	648 bp downstream
Gm24029	predicted gene, 24029	1546 bp downstream
Gm73992	predicted gene, 73992	within coordinates
Rr450061	regulatory region 450061	within coordinates
Tssr102510	transcription start site region 102510	1935 bp downstream
Tssr102511	transcription start site region 102511	1900 bp downstream
Tssr102512	transcription start site region 102512	652 bp downstream
Tssr102513	transcription start site region 102513	614 bp downstream
Tssr102514	transcription start site region 102514	584 bp downstream
Tssr102515	transcription start site region 102515	446 bp downstream
Tssr102516	transcription start site region 102516	184 bp upstream
Tssr102517	transcription start site region 102517	214 bp upstream
Tssr108748	transcription start site region 108748	1906 bp upstream
Tssr108749	transcription start site region 108749	1829 bp upstream
Tssr108750	transcription start site region 108750	1800 bp upstream
Tssr108751	transcription start site region 108751	1771 bp upstream
Tssr108752	transcription start site region 108752	1358 bp upstream
Tssr108753	transcription start site region 108753	1168 bp upstream
Tssr108754	transcription start site region 108754	968 bp upstream
Tssr108755	transcription start site region 108755	923 bp upstream
Tssr108756	transcription start site region 108756	893 bp upstream
Tssr108757	transcription start site region 108757	702 bp upstream
Tssr108758	transcription start site region 108758	463 bp upstream
Tssr108759	transcription start site region 108759	445 bp upstream
Tssr108760	transcription start site region 108760	383 bp upstream
Tssr108761	transcription start site region 108761	212 bp upstream
Tssr108762	transcription start site region 108762	139 bp upstream
Tssr108763	transcription start site region 108763	119 bp upstream
Tssr108764	transcription start site region 108764	937 bp downstream
Tssr108765	transcription start site region 108765	1082 bp downstream