rs26910350 SNP Detail

Summary

• ID
  rs26910350
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:8453835 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTACAATCT CTGCAACTCT
  GGCCAGCATC ATCTCTCCCT CCAGGAGCGA CCTGGCAAAG AAGACACCTG GAACCTCACA
  AAAGCTACAC GGAGACATTT GCAAGCACAC GCTCACTGCT TACCTTCCTT CTAAGTCCTC
  GACCACTCCT TCAATAGAGA GAGTCTGGCC AGTTCTAGGA AAGAGAGTCT TGGGCAGCAT
  Y
  GCGGGTGCCG CCTCCTTCCC AGAGCTCCTT GCCTCCCACT CCAGCTAGCG CAGAAGGCAA
  GAGTCTCCTT GGCTGCAGGG ACTTTGATTT TGCCCAAGAG GCCCAAGCAA TGTAAACATG
  CGGGCGGGGC TTGATGCAAT CAGGTTTAGT GAAATTTGAA CTCTTCGGGC CGAGGGGCGG
  GTCCAGAGGC CTCCACTCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37103176	NES08394201	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs26910350					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37103176	NES08394201	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:8453835 () rs orientation: forward

Symbol	Name	Function Class
Rr442533	regulatory region 442533	within coordinates
Tns3	tensin 3	within coordinates
Tssr106802	transcription start site region 106802	41 bp upstream
Tssr106803	transcription start site region 106803	32 bp upstream
Tssr106804	transcription start site region 106804	51 bp downstream
Tssr106805	transcription start site region 106805	1200 bp downstream