rs26910357 SNP Detail

Summary

• ID
  rs26910357
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:8453074 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTCAGCCA TAGAGCCACA
  GGACTCCCAC TGGCAGCAAC TGCCCTTGGC ATGTGACACC AAGAGCTTTA CAGGGCACTG
  GAGAAAGCCA GAGAAGCTCT GCATACCTGG ACAAACGTAG AGCAGAAAAG AAAGGACTGG
  AAGCAAAAGC GGAAACAATT TCCACACGGA CACACCAGGT CAGCAGTGTG TTGGACCTTC
  Y
  ATAAAGAAAG CTTGTCCCTC ACCCTGCCTC CTACAAGAGC GGCTGTACTG CCTGGAACCT
  AAGACGCCTG ACTTCTCCTG GGCGAGGCAC CAGAATATGG CAATAAAGGA AGGTCTGTGA
  CAGCAGGTCC CAAACAGGGC CAGGTGCCCC CGGCATACAA AGACACCCCA AACCCTCAAG
  TGCTGGCCAC AGGGTCGCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37103183	NES08394194	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs26910357					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37103183	NES08394194	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:8453074 () rs orientation: forward

Symbol	Name	Function Class
Rr442532	regulatory region 442532	1671 bp distal
Rr442533	regulatory region 442533	within coordinates
Tns3	tensin 3	within coordinates
Tssr106802	transcription start site region 106802	709 bp downstream
Tssr106803	transcription start site region 106803	722 bp downstream
Tssr106804	transcription start site region 106804	812 bp downstream
Tssr106805	transcription start site region 106805	1961 bp downstream