rs26910359 SNP Detail

Summary

• ID
  rs26910359
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:8452373 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGATACAG CAGGGTGCAT
  ATCGCTGGCA GGGTTGGTAG TGACAGGGGA ACCAGAATGC CATCTCTGTG CATGAGAGAG
  CCCATCACTA TCACCAGCCT AAAATCAAAG CTGTCCCATT GCACAAGGCA GGGATGAGCG
  CCAGCATGGC CCCAAAGCAC CCGCTTTCTT GGGGTCTAAT GTGGGCTCGG GTACGAGAAA
  K
  CCCATCTTCC ACCATCAGGA GACATGCTCT GGCATCGCCT TGCTAAGCAA CAGCAGGAAC
  TATTTTCAGA AGTCACTTTT TCTTCTTTCC ATGTAGACCT TAGTAACCAG AGCACTACTA
  GCTCCTCATT AAAACAAGCT TGGCTTTTAG TTTGTTGCAC CAGGGTTCTG TGTCTGTGCT
  AACTAAATAT TTCCTGCTTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss37103185	NES08394190	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs26910359					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37103185	NES08394190	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:8452373 () rs orientation: forward

Symbol	Name	Function Class
Rr442532	regulatory region 442532	970 bp distal
Rr442533	regulatory region 442533	468 bp proximal
Tns3	tensin 3	within coordinates
Tssr106802	transcription start site region 106802	1410 bp downstream
Tssr106803	transcription start site region 106803	1423 bp downstream
Tssr106804	transcription start site region 106804	1513 bp downstream