rs26913690 SNP Detail

Summary

• ID
  rs26913690
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:4091267 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGTGCATC TGCAAGGGCA
  TCATTAAAAG GAAAAAACAA AAACACAAAA CAAATGTTTG GGTAGGGAAG TTTTAATAGT
  AAAATAAACA TGGAATCTAT TTTAACATAA ATCTGTTAAG ACATAAATCT GTGTGATGCT
  TTAAGATATT AAGGAAAAGA TGGGTATGTG GTGACATATG CCAATAATCC CAGAAACATG
  R
  AGGTGGAGAC AGGAGGATTC ATAGTTTAAG ACCAGCTGGG CATAGCAGTG CACCCCTTTA
  ATCCTAGCAC TGGTAAGGCA GAAGCAGGCA GACCTCTGTG AGTTCAAGGC CAACCTGGTC
  TACATAGCGA GTTCCGGGAC AGCCAGCACT ATACAGAGAG ACCCTGTCTC AATATAACAT
  CACAAAACAA AAAGTTCAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37111216	NES08404186	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	A	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs26913690					SNP	G	G	G	G	G	G	G	A	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37111216	NES08404186	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:4091267 () rs orientation: forward

Symbol	Name	Function Class
Ccdc157	coiled-coil domain containing 157	within coordinates
Mir3060	microRNA 3060	1821 bp downstream
Rnf215	ring finger protein 215	95 bp downstream
Rr240236	regulatory region 240236	1467 bp distal