rs26913768 SNP Detail

Summary

• ID
  rs26913768
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:3581330 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAACAAAAG TGACTTTGTC
  ATCATCATCA TCATCACCAC AGGATTTTCA TGCTCCAGAA GTTTGAGAAA TGAATTTCTG
  TTGTTTACAC CACTCAGTGA ATAATCTGTG CCATGGCAAA TATGAACAAT AGAAGACATA
  GACCACTGGA GAAGAGACAG AGCCTGTCTG CAACATTCAA TATTATGAGG TTGTTGAAAT
  K
  CCATACAGAA GTTCTAGGAG CTTCTAGGAA TATTTAAAGT ATACAGATGC TGTGTATATT
  TTATCATTCT GTCGGCCAGT GTGGACCTGG GGAATGTATA ATGTATTCTT TTTTATTATT
  ATTATTTACT TTACATCCTG ATCACAGACC CCCTCCCTTC TCTCCTTTTA GTCCCACCCC
  CACAAATCCC TCCCATTTAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss37111997	NES08502758	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	T	G	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs26913768					SNP	G	G	G	G	G	G	G	T	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37111997	NES08502758	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:3581330 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2490	CpG island 2490	1765 bp distal
Gm11950	predicted gene 11950	1669 bp downstream
Gm11951	predicted gene 11951	1682 bp downstream
Rr441631	regulatory region 441631	1760 bp distal
Rr441632	regulatory region 441632	1889 bp distal