rs26922296 SNP Detail

Summary

• ID
  rs26922296
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:66989333 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCCCATTGC AGATGGTTGT
  GAGCCACCAT GTGGTTGCTG GGAATTGAAC TCAGGACCTC TGGAAGAGCA GTCAGTGCTT
  TTAACCGCTG AGCTATCTCT CCAACCCAGC AAGTTGTTGT TTTGAGTCTC TATACTATGT
  CTTAGCTCTG AGAAGCAGAG GTCTTTAGAG TTACAGAGAG CTAACGACAG GCATCTAGTG
  R
  GCGCTTCACA TTCCCAGGAG CCTGTGCAGA GGCAGGCGTT CAGATGCAAT GCGAGCTCAT
  TTCATTGCAG AAGAGATAGC AGATCTCACT GAACAGATTG CCGAGAACGG TAAAAGCATC
  CATGAGCTAG AGAAATCCAG AAAACAGATG GAGCTGGAGA AGGCTGACAT CCAGATGGCG
  CTGGAGGAAG CAGAGGTGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37173132	NES08486736	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs26922296					SNP	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37173132	NES08486736	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:66989333 () rs orientation: forward

Symbol	Name	Function Class
Mir6923	microRNA 6923	1297 bp upstream
Myh3	myosin, heavy polypeptide 3, skeletal muscle, embryonic	within coordinates
Rr449421	regulatory region 449421	1781 bp proximal
Rr449422	regulatory region 449422	1858 bp proximal
Tssr102156	transcription start site region 102156	559 bp downstream
Tssr102157	transcription start site region 102157	61 bp upstream