rs26922755 SNP Detail

Summary

• ID
  rs26922755
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:69300731 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTGA GAGTCTAGAG TACAAAGACC
  R
  GCGAGAGGCT AGTGTCGAGT ACAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ
ss37167296	NES08488285	PERLEGEN	MM_PANEL2	f	SNP	A			G	G	G	G
ss38835063	mCV22780435	ABI	CRAMUS_MOUSE	f	SNP		A	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ
rs26922755					SNP	A	A	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37167296	NES08488285	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:69300731 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3128	CpG island 3128	within coordinates
Gm72923	predicted gene, 72923	1413 bp upstream
Gm72933	predicted gene, 72933	8 bp upstream
Kdm6b	KDM1 lysine (K)-specific demethylase 6B	within coordinates
Rr247028	regulatory region 247028	within coordinates
Rr369256	regulatory region 369256	within coordinates
Rr402670	regulatory region 402670	1009 bp downstream
Rr402671	regulatory region 402671	245 bp downstream
Tssr3543	transcription start site region 3543	1181 bp upstream
Tssr102456	transcription start site region 102456	961 bp downstream
Tssr102457	transcription start site region 102457	601 bp downstream
Tssr102458	transcription start site region 102458	216 bp downstream
Tssr102459	transcription start site region 102459	185 bp downstream
Tssr102460	transcription start site region 102460	160 bp downstream
Tssr102461	transcription start site region 102461	126 bp downstream
Tssr102462	transcription start site region 102462	93 bp downstream
Tssr102463	transcription start site region 102463	646 bp upstream
Tssr102464	transcription start site region 102464	920 bp upstream
Tssr102465	transcription start site region 102465	1039 bp upstream
Tssr102466	transcription start site region 102466	1196 bp upstream
Tssr102467	transcription start site region 102467	1414 bp upstream
Tssr102468	transcription start site region 102468	1450 bp upstream
Tssr102469	transcription start site region 102469	1492 bp upstream
Tssr108665	transcription start site region 108665	1343 bp upstream
Tssr108666	transcription start site region 108666	745 bp upstream
Tssr108667	transcription start site region 108667	494 bp upstream
Tssr108668	transcription start site region 108668	483 bp upstream
Tssr108669	transcription start site region 108669	460 bp upstream
Tssr108670	transcription start site region 108670	336 bp upstream
Tssr108671	transcription start site region 108671	within coordinates
Tssr108672	transcription start site region 108672	463 bp downstream
Tssr108673	transcription start site region 108673	491 bp downstream
Tssr108674	transcription start site region 108674	535 bp downstream
Tssr108675	transcription start site region 108675	702 bp downstream
Tssr108676	transcription start site region 108676	747 bp downstream
Tssr108677	transcription start site region 108677	791 bp downstream
Tssr108678	transcription start site region 108678	807 bp downstream
Tssr108679	transcription start site region 108679	1106 bp downstream
Tssr108680	transcription start site region 108680	1760 bp downstream
Tssr108681	transcription start site region 108681	1791 bp downstream
Tssr108682	transcription start site region 108682	1834 bp downstream