rs26924973 SNP Detail

Summary

• ID
  rs26924973
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:62374808 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCCAAAGAT TTAGTTATTG
  TTATACATAA GCACACTGTA GCTGACTTCA GACACACCAG AAGAGAGCAT CAGATCTCAT
  TACAGTTGGT TGTGGTTGCT GGGAATTGAA CTCAGGACCT TCGGAAGAGC AGTCAGTGTG
  CTTAACCTCT GAGCCATCTC CCCAAGCCCC AGGCCTAGCG TTAATGACTG AGGTGAACAT
  W
  TGCCTATAGG AGTCAGGGTT GGCGTGGCCC TAAGATACAT ACATAAACGT TGCTTAGCCT
  GTTATAAGTG CAAGTGACAT CTCGCATAAG GCTGGGTAAT ATGGACTGAG AAGCAATGCT
  TAAGATTTAG GTGGGGCAGA ATCTAGAATA AACAAGTAAT ATTCTGGGGG ATACAGCTGA
  AGCCTGGCCC TACAATGGCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37187492	NES08412474	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	T	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs26924973					SNP	A	A	A	A	A	A	A	A	A	T	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37187492	NES08412474	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:62374808 () rs orientation: forward

Symbol	Name	Function Class
Gm12278	predicted gene 12278	within coordinates
Pigl	phosphatidylinositol glycan anchor biosynthesis, class L	within coordinates