rs26931509 SNP Detail

Summary

• ID
  rs26931509
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:5742881 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACCAAATG GACATTTCAT
  GTGACGTGGT AGGTGCCTGT GAGTTGTGGG TATCAGCATT CCTAGCTTCC TGCCGGCACA
  AAGCAGGACT CGTTTGTTCA TCAGAATGCT GACTGCCCTA GGTTCTATGG AGCCCTGTAG
  CTGAAATGCC TGACCTGGCT TCTGCTATGA CCTGGAAGTT TAGAGAGCAA AGCCCAGGGT
  Y
  AGGAAGACGC TTAGGGCAGC TCATCCTGGC CCCAGGCAGG GATGTGAGAG TTGAGCTTCA
  TCTTTGGAAT GCTCCAGAAA GGCCTGACTC TGATGGTCAA GTTTGTGACG AGGGAACATT
  ATAGGCCTAT TGTCTCAGGC CTACCTTGGT AAAATTGTCA CAGAAATCTA GTGATATGCA
  GGCACAGTGG CATACATTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37108349	NES08405943	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs26931509					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37108349	NES08405943	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:5742881 () rs orientation: forward

Symbol	Name	Function Class
Dbnl	drebrin-like	within coordinates
Rr250570	regulatory region 250570	1120 bp proximal
Tssr100199	transcription start site region 100199	828 bp upstream