rs26936886 SNP Detail

Summary

• ID
  rs26936886
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:70058694 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCTCCAGGC TGCCTCATTC TTGCTCTAAC ATGGCATATC
  CGACTTCAGT TCCAGGCTTT ACCTCATTAA AGCTTCTAGC ACTCTCCTTG GTCCCAGATC
  S
  GTATCTGTCT GGATCCTGGT GTCTTGGTTT CCGTCCAGAC AGCCCCAGAG GCCTCGTGTT
  TGTTCAAGTG TAACAATGAT ATACGAAAAC CTCCAGAAC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss37166327	NES08479088	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C		G	G	C	C		G	C	C	G		C
ss38823718	mCV23532899	ABI	CRAMUS_MOUSE	f	SNP	C	C				C		G
ss132366951	ENSMUSSNP11359	ENSEMBL	ENSEMBL_Sanger	f	SNP		C						G
ss323733894	CHEV_11_69981370	CHEVERUD	SCREENING_POP	f	SNP											C					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs26936886					SNP	C	C	C	C	C	C	G	G	C	C	C	G	C	C	G	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37166327	NES08479088	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:70058694 () rs orientation: forward

Symbol	Name	Function Class
Clec10a	C-type lectin domain family 10, member A	within coordinates
Rr251315	regulatory region 251315	832 bp distal
Tssr102659	transcription start site region 102659	1205 bp downstream
Tssr102660	transcription start site region 102660	1161 bp downstream
Tssr102661	transcription start site region 102661	1084 bp downstream
Tssr102662	transcription start site region 102662	670 bp downstream
Tssr102663	transcription start site region 102663	646 bp downstream