rs26974851 SNP Detail

Summary

• ID
  rs26974851
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:48696333 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAGAAAAA TAACTGTTAG
  AAATCTGAAT TATATAAAGT AATTCATTAT TTGAGTATAA GTATATACCT GTGGGTCCCA
  CTAGCTGGCC TCATAGCTAA GCAAACCTTT CTCCATAGTT GTTTCTGGGT GAAACCTATG
  TTGCCAAGCA AGGCGTTTTC ACATGTAACC AGCCTGCCAG CTCTCTTGAA AGGATTCTAA
  R
  AGCAATGGTA TCCTTACGGG CTTTGGTCTG TTCCTCAGGA CTTGGAGGGC AAGATCATTG
  TAGATGAATT GAAGCAAGAA GTTATCAGCA CCAGCAGCAA GGCAGAGCCA CCCCAGTGTA
  CCTCTTTGGC ATGGTCTGCT GATGGCCAGG TAAGTATATT TGACAATTCA GCTCAGTTCT
  CCAACTTATC TCCCTTGCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37219180	NES08451612	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs26974851					SNP	A	A	A	A	A	A	G	A	A	A	G	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37219180	NES08451612	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:48696333 () rs orientation: forward

Symbol	Name	Function Class
Rack1	receptor for activated C kinase 1	within coordinates
Trim41	tripartite motif-containing 41	898 bp downstream
Tssr107636	transcription start site region 107636	77 bp downstream