rs26975607 SNP Detail

Summary

• ID
  rs26975607
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:51704187 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACAGGAAGG AATGGTGCCA
  CTCCCTCAGA GCCATTCTCT CTGCACCCGA CCTTTGATAT GGTACTTTAC TGGAGGCTTG
  ATCTCAGGTA ACCATCTCCT CGCTGACCCT GAATGCCAGG GGCTAACCCT GAAGATCACG
  ACATTCCCTC CCTCTAAGGT GTAGCCAGTG GTGTGCGCTG AAGGTTTGCA AGCGCCACTG
  S
  AACTCGGGAC TCTTGCCGAG CATACTGTCG GAGGCACGCG ATGGGATTTC TAGGTCTCTT
  AGCCACCTAA CACAACAGAA CGTCATGGCA GCCAGCACAG AGAACATTGC TTTATTAACC
  GAGTTTGCCA ACACATGAGG AGTGCTGTGG GCTCCTTAGA CACAGACCCT GGTGGGGGCC
  GGCAATCCGG ATGCCCCAGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37213034	NES08443191	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	C	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs26975607					SNP	G	G	G	G	G	G	G	G	G	G	C	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37213034	NES08443191	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:51704187 () rs orientation: forward

Symbol	Name	Function Class
Jade2	jade family PHD finger 2	95 bp downstream
Rr446700	regulatory region 446700	1924 bp distal