rs26975608 SNP Detail

Summary

• ID
  rs26975608
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:51704162 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTATGTGGT CAAGGTACTA
  CCTACTACAG GAAGGAATGG TGCCACTCCC TCAGAGCCAT TCTCTCTGCA CCCGACCTTT
  GATATGGTAC TTTACTGGAG GCTTGATCTC AGGTAACCAT CTCCTCGCTG ACCCTGAATG
  CCAGGGGCTA ACCCTGAAGA TCACGACATT CCCTCCCTCT AAGGTGTAGC CAGTGGTGTG
  Y
  GCTGAAGGTT TGCAAGCGCC ACTGGAACTC GGGACTCTTG CCGAGCATAC TGTCGGAGGC
  ACGCGATGGG ATTTCTAGGT CTCTTAGCCA CCTAACACAA CAGAACGTCA TGGCAGCCAG
  CACAGAGAAC ATTGCTTTAT TAACCGAGTT TGCCAACACA TGAGGAGTGC TGTGGGCTCC
  TTAGACACAG ACCCTGGTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss37213035	NES08443190	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	T	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs26975608					SNP	C	C	C	C	C	C	C	C	C	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37213035	NES08443190	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:51704162 () rs orientation: forward

Symbol	Name	Function Class
Jade2	jade family PHD finger 2	120 bp downstream
Rr446700	regulatory region 446700	1899 bp distal