rs26986919 SNP Detail

Summary

• ID
  rs26986919
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:86701751 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTGAGAACA GATGGTAAAG
  ACACCCTGAC TCAGGGGATG TGATGGAAAA GGCTGGGACA GGCCATAGTG GTGCACACCT
  TTGATCTCAT CTCTTGGATG CAGAGGGAGG AGGATCACTG TGAGTTTGGG GCCAGCCTGG
  TCTACACTTG AAGTTCCAAG CCCATGGGGC TACATAGTGA GACCCTGACT CAAAAAGCAA
  R
  ACTTGTCAAT GAAATTATTT GGTGCATAAC TGAACATGTT TAGGATCATT GTGTAATACA
  GGCATTGAAG TGGTCACAAT TCAAGGCTCA TTAAGATTAG TATTATACAT TTACATTTGG
  GTCAAATTTC AATCCTTAAA TATCAGTCTG GTCCTCTGTG TTTTCCTTTT CCTTTTAGAT
  TTGCCTGGTA CAGTGAAGCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37229645	NES08590347	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs26986919					SNP	A	A	A	A	A	A	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37229645	NES08590347	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:86701751 () rs orientation: forward

Symbol	Name	Function Class
A130040M12Rik	RIKEN cDNA A130040M12 gene	903 bp downstream
Rr402834	regulatory region 402834	962 bp upstream
Rr453657	regulatory region 453657	within coordinates
Rr453658	regulatory region 453658	779 bp proximal