rs27014434 SNP Detail

Summary

• ID
  rs27014434
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:121085195 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATAA ATGTTTTATC TCTAATAGTA
  Y
  TTCCTTCTCC AGCAGCAAGA CTGTA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	DBA/2J	FVB/NJ	KK/HlJ	PWD/PhJ	WSB/EiJ
ss37236862	NES08512781	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	AKR/J	DBA/2J	FVB/NJ	KK/HlJ	PWD/PhJ	WSB/EiJ
rs27014434					SNP	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37236862	NES08512781	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:121085195 () rs orientation: forward

Symbol	Name	Function Class
Ogfod3	2-oxoglutarate and iron-dependent oxygenase domain containing 3	within coordinates
Rr239420	regulatory region 239420	395 bp distal
Tssr112449	transcription start site region 112449	1983 bp downstream