rs27016050 SNP Detail

Summary

• ID
  rs27016050
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:115537434 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAGAACAG TCAGTGCTCT
  TACCCGCTGA GCCATCTCTC CAGCCCCTCT TAACAGGTTT GAACACACTC TCAGCATTCC
  CTCACTCGGG CTGTAAACGA GGCAGTCCTA ACCAGAACTC CTGCTCATAC GTGAGGAGGA
  CTGAGTGCAT CCCTCACAGG CTGGCTGCAC AGGGACTCAA CCACCTGAGT GCCAACTGCA
  R
  AGCCTCACTG CCATGAGGTC GGCCTGAGCA CACAGGAAGT CGCTGTGGTG TCACGCCTGG
  GCCTTCACAC TTGCTGGAAG TGAGTAAAGC TCTTTGCTTA CCTGTGGCAT CTGTTCTATG
  TCCCGTAAGA ATATCTGCTG GTTCCTGGAC ACGGATGTTG ATCTGTGGTA ATCTACCAGC
  TCATTCAAAG AATTAAACTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C3H/HeJ	MOLF/EiJ
ss37247980	NES08525715	PERLEGEN	MM_PANEL2	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C3H/HeJ	MOLF/EiJ
rs27016050					SNP	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37247980	NES08525715	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:115537434 () rs orientation: forward

Symbol	Name	Function Class
Grb2	growth factor receptor bound protein 2	Intron
Rr459980	regulatory region 459980	261 bp distal
Rr459981	regulatory region 459981	878 bp proximal
Rr459982	regulatory region 459982	1026 bp proximal
Tssr111788	transcription start site region 111788	1543 bp upstream
Tssr111789	transcription start site region 111789	1369 bp upstream