rs27025210 SNP Detail

Summary

• ID
  rs27025210
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:102517451 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCCC ATTCCTCATT CATCCCCAGG
  R
  TTCCAATTCT TTCTGTCCCA GTGAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	C57BL/6J	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37279835	NES08552895	PERLEGEN	MM_PANEL2	f	SNP		G	A			A	A	A	A	G
ss38755198	mCV24855021	ABI	CRAMUS_MOUSE	f	SNP	A	G		A	A
ss132737668	ENSMUSSNP74556	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G			A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	C57BL/6J	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27025210					SNP	A	G	A	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37279835	NES08552895	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:102517451 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3931	CpG island 3931	1107 bp distal
Rr457378	regulatory region 457378	1726 bp distal