rs27057437 SNP Detail

Summary

• ID
  rs27057437
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:101198552 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACTGGTGAT TGGGTCCTTG
  CAAAACTAAA CAAGTTATTC TGACTTCCAT GCTCTTCTGT TATTTCACAA GGATGTTATC
  CCCCTGTGGT GGTGCTGAAT ATCGTAAGTC AAATTCCTTG ATATTTTTTT CTTTCTGCTA
  ACTAAAAAGT CTTCATACAA CTCCTTTCTC TTGGATCTTT CAGCATTTAA GACCCTCACT
  Y
  CTTGAGGAGA CAGAGTCATA TCCAAAGAAT TCTCACTTAG AGCTAGTGTG TCTGGTTACA
  TCTAATAGTT CTTTCTCCTT GGCTGCCATC AAAAAGGCAT AGAAAATTAA CCAGCTTCCA
  GACAGGTAAG GACTCAAGCA GTTATTCGGC CACACCCAGG GCTCTCGGCA TGATGTTATT
  GTGCACTGTG TAAAGATTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss37282659	NES08553163	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs27057437					SNP	T	T	T	T	T	T	T	T	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37282659	NES08553163	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:101198552 () rs orientation: forward

Symbol	Name	Function Class
Gm11617	predicted gene 11617	346 bp downstream