rs27060669 SNP Detail

Summary

• ID
  rs27060669
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:93541996 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCAGCATAG TCCTGCGACG
  TTTCACTGTG GTGGAAGGGA CTCAGCTCCG GATTCTGTAT AGAAAAAACA CCTGGATCCC
  AGTCTTTCAA TGGCTTCAAG ACAACCAGAA GTGCCTGCTC TTGCTCCCAG TGGACCTCTA
  GGCAAGATGT CCCTGCCCAT CGGGATGTAC CGCCGAGCAT TCAGCTAGGA TGATGCCCTA
  R
  AGGACCCTGC GACCATGACG CCTCCTCCAT TGGACATGGA TAGCATCCCT GGAAGTCAGT
  GATTCCAGAG AGCAAGTATC AGCATCTTGA CAAGACAGAG GAAGGAGCAG TCAGTGTCTC
  TTCCCTTGCT GGGACGCCAT CACCAGCCAC TGACAGTTCA GACAAGGCCC CTGTGGTGAA
  GGCTAAAGCT ACCCATGTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss37301589	NES08567929	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs27060669					SNP	G	G	G	G	G	G	A	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37301589	NES08567929	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:93541996 () rs orientation: forward

Symbol	Name	Function Class
Gm11502	predicted gene 11502	within coordinates