AGAAT CCAGTTATAG CCTGTTCTAC R CCAGACAAGA GCCGAAAACG TTGTA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
C57BL/6J |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss37319085 | NES08824362 | PERLEGEN | MM_PANEL2 | f | SNP | A | G | G | G | G | A | G | A | G | G | G | G | G | G | ||
ss45253891 | mCV25284783 | ABI | CRAMUS_MOUSE | f | SNP | A | G | G | A | ||||||||||||
ss146277184 | ENSMUSSNP1979360 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | G | A | |||||||||||||
SNP Consensus Information | |||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
C57BL/6J |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
WSB/EiJ |
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rs27093262 | SNP | A | A | G | G | G | G | A | G | G | A | G | G | G | G | G | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss37319085 | NES08824362 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr2:6260604 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
A230108P19Rik | RIKEN cDNA A230108P19 gene | within coordinates | ||||||
Gm13383 | predicted gene 13383 | within coordinates | ||||||
Gm46730 | predicted gene, 46730 | 1045 bp upstream | ||||||
Rr551353 | regulatory region 551353 | 508 bp proximal | ||||||
Rr551354 | regulatory region 551354 | 555 bp proximal | ||||||
Tssr22443 | transcription start site region 22443 | 491 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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