rs27094236 SNP Detail

Summary

• ID
  rs27094236
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:13211043 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATCTAAGT GCTTATTTTA
  GAAGAGGCAT TGAAAGAGAA AGCTAACTTC TCACCCAAAG CTAAAAACAA CAAACAAACA
  AATAAATCAA ACTGGTAGGA AAGTAAGTGG AGGGGAAGGG AGCTTAGTAA GAAGTCAAAC
  ACGGGTAAAG AAACCCCAAC TACAAAGCTA GTTCTCTGAA AGAACTAAAT CGCTACTAAA
  R
  TCCCTTCTGA ACCAATCCAA GGTGGTAGGA GCAAGAGCAG AGATGCAAAT CCCAACTATA
  CCAAGCCAAC ACAGACAGCA TTGATTTAAA AGGTGCACAT CAGCATAAGA GGTGCACATA
  AGGTTTCTGA GACACCCAAT TTACCATCAG ACAGTAGGAG AAATAGAGAA ATAGAGAGTC
  TTCAGAGAAC CGGAGAGTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37331865	NES08803462	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27094236					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37331865	NES08803462	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:13211043 () rs orientation: forward

Symbol	Name	Function Class
Rr551952	regulatory region 551952	201 bp proximal
Rr551953	regulatory region 551953	774 bp proximal
Rsu1	Ras suppressor protein 1	Intron