rs27106727 SNP Detail

Summary

• ID
  rs27106727
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:94071954 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGGT GGGAGGGCAT GTTGAGCCAC
  R
  CTAAGGGGCA TCTTATTGAC CTTGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
ss37300359	NES08571812	PERLEGEN	MM_PANEL2	f	SNP		G	G	A	A	G	G		G	G	G
ss132635220	ENSMUSSNP4526223	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss323812242	CHEV_11_94042442	CHEVERUD	SCREENING_POP	f	SNP								G				G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
rs27106727					SNP	G	G	G	A	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37300359	NES08571812	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:94071954 () rs orientation: forward

Symbol	Name	Function Class
Tssr110134	transcription start site region 110134	786 bp upstream