rs27129028 SNP Detail

Summary

• ID
  rs27129028
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:36531831 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATATTTATT GGGTGTGATG
  TGATATTTTC ATACATGCAA ATAGTTCAAA AACAATGTTA ATTTATTCAA ATATTTTCCA
  TGACTTTGTA TGAAATTCTT TTTATTTTAG CCTTTGGAAT GCAATATAGT ATTTGTAATC
  ATCTCACAGT GAAAGGTATA AAAATGCTTT GTGTTTTTAT GAAAAATTTG TACCTACTGA
  R
  CAAACTATGC ATATGTTTCA TTCCTATTTC ATTTATAATC TTATTAATTT TTCTGAAAAT
  TTAATTTGTG GTGGTTCATA ATTCCTTGCA TTTTTGATAA GTGTTTGGCC CTAGTTACTA
  AGTTAAGTAA AAATAAACTG TTCTATATAT AAGATAAAAA CAAGAGTAAG GCATGCTCTA
  CATGGAGCAT GAAAGTACTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss37389547	NES08747435	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs27129028					SNP	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37389547	NES08747435	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:36531831 () rs orientation: forward

Symbol	Name	Function Class
Or1j16	olfactory receptor family 1 subfamily J member 16	843 bp downstream