rs27137455 SNP Detail

Summary

• ID
  rs27137455
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:21184905 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTAACCAAG CTTTCCTAAC
  TTAAAATTTC ATGAAAAAAG TAATTTATTT CTTAGATATG TGTAGATTTG TTTCTTATTT
  TGAGTTGAAG GTACTTCTAG GCACATAAAT CTATTGATTA ATAAGCTGAG TAATCTTATA
  AAAGGTTACT TTGGGATTCA TAAACTCCAT ATTTACACTG TACCCAGATG GAAACAGACC
  S
  GAGAGCTTAG TGAAAGATTC ACAGTAAATC ATGGAACAGA TCACAGCATC ACAGTCAGGA
  TACTGGGCTT GTGCATTTTG TCCTGTCCTT GGGTGACTCT GCTCCTTTTG AATGGTGTGC
  TGGAAAACTC ACTTTGTTTC TGCCTCCCTC ACCCCTATCC CCAGTGATCT TTCAGGTCCT
  GCTACTGAGC TACATCCAGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37357880	NES08798230	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27137455					SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37357880	NES08798230	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:21184905 () rs orientation: forward

Symbol	Name	Function Class
Enkur	enkurin, TRPC channel interacting protein	637 bp downstream
Tssr420	transcription start site region 420	1185 bp downstream