rs27137461 SNP Detail

Summary

• ID
  rs27137461
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:21184376 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAACTTCT CTTTATTTGA
  TTAGGGCTGG TTTGTTAAAG AAGTTTGTAA TTGGTGGCTC AGACAATGTT GGGTGGAACA
  GTATTCAACA TTCGTAGATT GTCCGGCTCA CGTCCTTTGG TCTCTGGATA GGATATAGCC
  TGCCCACTCT GAGTCTGCGG CTCTGGATGT GACCTCCTTA CATCACACAA GAGCTGTACG
  R
  CCTGGACTGG GTTTCTATTG TGGTTAGTTA CTTACTTTGT GGTCTATTGT TGCAGCTTTT
  TACCTGGACA AGTGGCATTT TACCATGTAA CATCTTTTGT ATTTGTCATG CACTGCCCTT
  AGTCTACATT TGTTCCTAAT TAATAAAGAA TTCATAAGAA AACCTTAAGA TGAATTTTCA
  AAAATAGTGG CATTAAAAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37357886	NES08798224	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27137461					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37357886	NES08798224	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:21184376 () rs orientation: forward

Symbol	Name	Function Class
Enkur	enkurin, TRPC channel interacting protein	1166 bp downstream
Tssr420	transcription start site region 420	656 bp downstream