rs27156673 SNP Detail

Summary

• ID
  rs27156673
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:18117248 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACCAAACCAA ACCAATTTTC TTTATAAATT TTGAAATAAC
  ATCAAGTTTA TTTACAGGCT CTGGGAGAAG TACAGAGTTC TTCCTCTTAG GCCAAACTGT
  R
  TATCCCTATA AGAAGGACGG TTTTTTGGCT TAGAATAAAT AGCTCTGGGG TAGAGTCTCC
  TAGTATATGC CAGGTCCTCA GTTCGGTGCC TCCAGCACT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss37368209	NES08791116	PERLEGEN	MM_PANEL2	f	SNP	A			G	A		G	A	A	A	A
ss45345321	mCV25167567	ABI	CRAMUS_MOUSE	f	SNP	A	A	A			A	G
ss146306470	ENSMUSSNP4387597	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs27156673					SNP	A	A	A	G	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37368209	NES08791116	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:18117248 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Mllt10	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10			Intron
				Noncoding-Transcript-Variant
Rr552304	regulatory region 552304			704 bp distal