rs27187747 SNP Detail

Summary

• ID
  rs27187747
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:140828651 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGAAAAGTA GATCTCTCCA
  GGAAAGAGCA CACCAAGCAG TTATCCAATA CCAATGGCCA TCCCTGAAAA CATGTGTACA
  AATAACATGC AGACTTAGTT TATTTTAGGA TCCACACACA CACACACACA CACACACACC
  TCACACACAC ACACATGGCT CCTAGTTCTG CTTTCTCCCT CAGGGTGTTT AGACACTGAT
  R
  CACTGATGCC TGATGCATGG CAGGCTGGAT AGATAAAGCA GACCCTGAAA TGGGTGGGTT
  CTGCAGGATC CTGGTCTGGC TGGGAGTATT GCGGTTGGGG TTGGGGTTGG GGTGGGTGTG
  GGTGTCACTT CTCCAAAAAT TTTAGTGTTA CAGCTCTTTT AGACAGCGCT CAGTGAAACT
  GCTCTCTTAG ACGGTCTTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37436468	NES08955061	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27187747					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37436468	NES08955061	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:140828651 () rs orientation: forward

Symbol	Name	Function Class
Macrod2	mono-ADP ribosylhydrolase 2	Intron
Rr566134	regulatory region 566134	161 bp distal