rs27187758 SNP Detail

Summary

• ID
  rs27187758
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:140827542 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTTCTCCT CTCTCAGGTC
  ATCTCCACTT TCAATCCTTT CTTTTCATCA TCTCCCCTTC CTCCTTTTTC TCCCCCCCAT
  TTACCAAGGG TTCTGTAGCC TTCACACTTA CTGCACTGGC TAACGGTCAT ATTTTAGAGG
  CTGGAAGAGA CACATTAGTA ATGTTGAGAT GACTTAATAT GGTCATGGAA AACTAAGTGG
  R
  ACCCTGCAGA AGGGAGGAAA CCATATACAG ACTAGATGCT CAGATCTCAC TCTTACTGTG
  GCCTACATCT GGTCTCAAAA TGTTCTACAA GTAAACAAAC AAATGCACAC ACAACCCTGA
  GGATGGCAGT AAAAGGTACC TTTTCAAGGT GTATTTCTTG AAACTGTGCC TCGTGGGAGC
  GTGCATGTGT CCTGAGTTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37436479	NES08955048	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27187758					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37436479	NES08955048	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:140827542 () rs orientation: forward

Symbol	Name	Function Class
Macrod2	mono-ADP ribosylhydrolase 2	Intron
Rr566134	regulatory region 566134	138 bp proximal