rs27187805 SNP Detail

Summary

• ID
  rs27187805
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:140809302 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGCTGTTGA CCACTCACAG GAGCTACAGA AAAGAGCAGA
  GACAGAGCCT AGAAGGTTTA TCTACACATT GGTCTTATTG GCAACCTCCC TGTAGGGAAT
  Y
  CTATAACACA AAAATAAGTC AATAGACACT TTCTGAGAAA GTAAGAAGGC CGAGGGATGT
  TACACATGTG GGCACCTTTT GCCATTTTTC TCTGTTATA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	SM/J
ss37436526	NES08955376	PERLEGEN	MM_PANEL2	f	SNP	C		C		T		T	T
ss147692917	ENSMUSSNP243579	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
ss320529144	CHEV_2_140793118	CHEVERUD	SCREENING_POP	f	SNP						C			T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	SM/J
rs27187805					SNP	C	C	C	T	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37436526	NES08955376	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:140809302 () rs orientation: forward

Symbol	Name	Function Class
Macrod2	mono-ADP ribosylhydrolase 2	within coordinates
Tssr20486	transcription start site region 20486	1436 bp downstream