rs27187811 SNP Detail

Summary

• ID
  rs27187811
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:140807206 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGTGATAAT GTTAGCAAGT GGAGGAGAGA CTAGATTTGT
  ATAGCCCAAG CAGACAATGG ATGGACCTCA AGGATTTCCA CCAGAATCTC AAATGTTCTG
  R
  ACAATGAGAC TAAGAGTAAT GAGCTCACAG GGTGATCCTA CTACTGATTG GCGATGTGAC
  CTTAGGCAAG GCACTTAATC ACGTTGCATC TCAGTTTCC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	SM/J
ss37436533	NES08955390	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	A		A	A
ss320529129	CHEV_2_140791022	CHEVERUD	SCREENING_POP	f	SNP						G			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	SM/J
rs27187811					SNP	G	G	G	G	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37436533	NES08955390	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:140807206 () rs orientation: forward

Symbol	Name	Function Class
Macrod2	mono-ADP ribosylhydrolase 2	within coordinates
Tssr20486	transcription start site region 20486	641 bp upstream