rs27189267 SNP Detail

Summary

• ID
  rs27189267
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:141016901 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCAGTTGGCA GTTTCTTTCA AAGGAAGGTC ATTATGGAGC
  TAGGGAGCCT CCCCTTTCCC CCCTTAACTC TGTTCTTTTC TCATACCTAA GAGTATGTCA
  R
  AGGATTCCCT GTAATATTTT ATCATGATTT TGTGACATTT CATGATGAAG AATGAAGTGT
  GATATAAAGT TTTCCAAGTG AGGGTAAGAG AAGTAAGCT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss37435486	NES08949146	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	A	A	G	G	A	G		G	A	G	G		G
ss147699465	ENSMUSSNP3462582	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A						G
ss320529851	CHEV_2_141000717	CHEVERUD	SCREENING_POP	f	SNP												A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs27189267					SNP	A	A	A	A	A	A	A	G	G	A	G	A	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37435486	NES08949146	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:141016901 () rs orientation: forward

Symbol	Name	Function Class
2900060K15Rik	RIKEN cDNA 2900060K15 gene	89 bp upstream
Macrod2	mono-ADP ribosylhydrolase 2	within coordinates