rs27208364 SNP Detail

Summary

• ID
  rs27208364
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:31052265 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGCAGTCC TCCTGCCTCA
  AGCTTTCAGA GCCAGTATTT CTTGCTTGCC AATATAAGTT AAAACCTACA CGAGGACCTA
  GCCATTTCCC GAGGAGGGAA GGGATGGAGA AGGACGAGAT CCAGAGACAC AAAGGACGTA
  TTCGCTCACT GCTGCTCCTT CTCCTTTTTC CCTCGCTGTG ATCTGGAGCG CGTGTGTCTA
  R
  GCACCTGATG CTGGGGCCGT TAGGGACACA GACTTCTTCC TCTTCTAACT GAGTGCCCGT
  CCCAGACTTG AGTGTTCTGT TGTCCACACA CTTCCCTGCC CAGCCAGGAC CTCAGCCTGG
  CTTCTGCCAG CCCAGTAGTA AATGGTGATA TCTCATTTAA ATTGACTGTT GGTGAGGTTT
  CGGCTGGCAG CATGTTTATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss37403286	NES08764374	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs27208364					SNP	A	A	A	A	A	A	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37403286	NES08764374	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:31052265 () rs orientation: forward

Symbol	Name	Function Class
Gpr107	G protein-coupled receptor 107	within coordinates
Rr372995	regulatory region 372995	within coordinates
Tssr23435	transcription start site region 23435	1273 bp downstream
Tssr23436	transcription start site region 23436	1310 bp downstream