rs27223077 SNP Detail

Summary

• ID
  rs27223077
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:31049786 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGGGCTCT TACTTTCTTC
  AGACTCACAG CCTGAAGCCA TGTGACAGGA GGGGAGGTCA GCACAGGAGG CAGAGATGTG
  AGTGTGACAT CTGTGCAGAT GTGGGATCAT AGAATAATGG GGCTAGGAGA TGCTGCCGCT
  AAGTAGTCTT AGCACTTTGC AGTGCCCACC TTATACTTAC ACAGAAATAT ATGCTGTGTA
  R
  ACTAATGTTT TGGAAAGAAA TATCCATGAG CATTCTATAA CTTTGGATTC AAGGATTGCT
  TAAATGTAAC TAGTTTGTGT GTGTACATAT GTGCACACAG GTATGCATGC CTGAGCGCAT
  GTATAAAGGC AGGATTAGGG TGTTATGTGT CTTCTTCCAT CTCTGTCACT CATTCCTTTG
  AGACGGAGTC TCTCTGAATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37403299	NES08750682	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27223077					SNP	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37403299	NES08750682	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:31049786 () rs orientation: forward

Symbol	Name	Function Class
Gpr107	G protein-coupled receptor 107	within coordinates
Rr372995	regulatory region 372995	1787 bp upstream
Rr554554	regulatory region 554554	476 bp proximal