rs27246384 SNP Detail

Summary

• ID
  rs27246384
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:149507568 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCATTGTA GTCTATTCCA
  GCTGCTCTGC TGAGTATTTC AGAGAAATGT GTCTCTTAAT ATTCTTACAA GCCACATAAA
  CAAGACAGCA TTTAAGTTTC TATCTTAAAG GCAACTGGGC AACAGTAGCA CCTAAAGTCA
  GATGGGTCTT ATAGAGCTCT GCACTAATCC TTTCAGCCTT CTCTTATTCT TTGGAACAAT
  K
  ACTGTCTATC CATGTATCCA CGTGCATACT GGAGATAGAG CTCCATCTGA ATTCCATAAA
  CAGGAACTCT AGTCTAGGAG TAAGACTATA TGGTCGCTAA CGATCTGCCT TTAAAGGAGC
  TGCTTAATTT CTGGAAGCCT TAGATACTTC TGTCAGAGGA AGATGAGAAA ACATCTGACC
  TCACTGTGTC ACCTTGGGGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	NZW/LacJ	PWD/PhJ
ss37487603	NES08918780	PERLEGEN	MM_PANEL2	f	SNP	T	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	NZW/LacJ	PWD/PhJ
rs27246384					SNP	T	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37487603	NES08918780	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:149507568 () rs orientation: forward

Symbol	Name	Function Class
Gm53264	predicted gene, 53264	within coordinates
Rr566994	regulatory region 566994	805 bp proximal