rs27270046 SNP Detail

Summary

• ID
  rs27270046
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:132822017 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCACTGGCT CTTCTCCTTC
  TGCTTAATTT GGCTAAGGGT TTGTCAATGT TTATCTTTTC AAAGAAGAAC CTTTATTTCA
  TTAATTCTTT GCATAGTTTT TTTTTCATTT TTATTTCTGC CTAGAATTTC ATGATTTTTT
  TTCTTGTGTG CTATTTTGGG ATTTCGTGTG TTCTTGTTTT TCTAAGACTT TAAGGTATAT
  Y
  ATCAACTTAT TTAAATAAGG TCTCTCAGAT TTCCCCCGTT TTCTATCTTT TTATTAACTC
  ATACCCAACT GCTTGTCTTC TGGTTTGTTG AAGCAGTAAG TCTGATAACA CATGCCAGAG
  CAGTGCCTGT CAAAGTGGCT AGCTCTGGAA ACACCGGCAC AATCTTTATG AGAAGGACAT
  GTTTCAGGAA GGAACTGATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss37463170	NES08981957	PERLEGEN	MM_PANEL2	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs27270046					SNP	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37463170	NES08981957	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:132822017 () rs orientation: forward

Symbol	Name	Function Class
Gm14101	predicted gene 14101	72 bp downstream