rs27270065 SNP Detail

Summary

• ID
  rs27270065
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:132820328 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATACAAGT TTCTGACCTG
  GATCTTGGCA TGGAGATCTT GAGGCCTAGT GACAATGAAT TCCAGGAGAC TAAGGCAAGG
  GGATCTCCGA GTTCCAGGTC ATCTGGGACA AAGCAAGTCC CAGATCCAGG CATGGTGGCA
  CACACCTTTA ATCTGGGCCA CATCTTCTGC TGGAGACCTA CATAAGGACA TCGGAAGAAG
  R
  AAGGCTCTTT CCTCTTTGCC TGCTTGCTTT GTGGGATTGC GAAACTGCTA GATCCTGGGA
  TTTCCATTCA CAGCTGATAT GATCATTGTT GGGGAGTTGG ACTACAGACT GTAAATCATC
  AACGAACTCC CTTACTATAT AGAGACTACC CATAAGTTCT GTGACTGTAG AGAACCCTGA
  TGAATACAAT GACCAAAAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss37463189	NES08981938	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs27270065					SNP	A	A	A	A	G	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37463189	NES08981938	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:132820328 () rs orientation: forward

Symbol	Name	Function Class
Gm14101	predicted gene 14101	1761 bp downstream
Rr565567	regulatory region 565567	1218 bp distal