rs27273695 SNP Detail

Summary

• ID
  rs27273695
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:131172329 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCATTTTAG GATCTAATTC
  AGGGTCATAC CTTGTATTTA GTTGTAACTC TTTAGTCTCT TCCAAAATAT GACAAAGAAC
  TATGTCTTTT AAATTAAAAT TAATCAGGGT TCTTCTTATT CTGAAAATCC CATGGTATTC
  AGAACAGAGC CCTGAATACT AACCACCAGC CTTGGGGGTT GTTAGGTCTA TGTGATAACT
  W
  AGAAAAGGCT GTGAAATCAG AGCAAGTGGT TCTAAGGACA GAAAGAGTGT GTGTGTGTGT
  GTGTGTGTGT GTGTGTGTGT GTGTACTGGA GGAAATGATG CACATGGAGG TGGATGTGTG
  GGTGCCACGG TGCACATGTG GAGGTCAGGG GACAAGTCTG TGGAGTCCTC TTTTCCCACA
  TTTCCACGGG TTCTAGGGAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37469219	NES08983269	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27273695					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37469219	NES08983269	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:131172329 () rs orientation: forward

Symbol	Name	Function Class
Rnf24	ring finger protein 24	within coordinates
Tssr26391	transcription start site region 26391	1420 bp upstream