GTTGGCAATT GGTGAATAAA GAAGTAATTG AGGGTTTATG TCGTCCTCCC CATAGGGGAA AGGGAAAGTC AGAGAACAGA GACACGCAGG CTGCTACCAG CCATTTTGAA ATTTATGTTT AAAAGAAATC TCTGAAGTTA CAAATTACAT ATTACTTCTG TACATCCAAG GGATGTTTCA TTTACTATAT CCTATTTACT K AACTAAGGAC AGGTTTTTTT TTTGGGGGGG GGGTATTGTT TAGTGACTCA ATAATATCAT TTCTTCTCCA CGAAACTCCT AGAAATTTTA GCATTTAGAA GATGAGGGAA AATACAGTTG GCTCAGCTGA GGTGCAGCCT CTTGGAGCTA GTAATTATGT CCCATCTGTT TGGAGAAATA AGTTGGCTTT TAAGAGAGTA K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss37456347 | NES08975374 | PERLEGEN | MM_PANEL2 | f | SNP | G | G | G | G | G | G | T | G | G | G |
SNP Consensus Information | |||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
||||
rs27284318 | SNP | G | G | G | G | G | G | T | G | G | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss37456347 | NES08975374 | PERLEGEN | MM_PANEL | f | SNP | G/T |
Location: Chr2:134943788 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Plcb1 | phospholipase C, beta 1 | Intron | ||||||
Rr565720 | regulatory region 565720 | 98 bp distal | ||||||
Rr565721 | regulatory region 565721 | 81 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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