rs27308407 SNP Detail

Summary

• ID
  rs27308407
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:156032715 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCTA CTCAAGAGGT TCTGCTCATC
  S
  CGACTGTGAG AGATAAGGAG CTTGC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BTBR T<+> Itpr3/J	LG/J	NZW/LacJ	SM/J
ss37550536	NES08896631	PERLEGEN	MM_PANEL2	f	SNP	C	G		C
ss320578111	CHEV_2_156016531	CHEVERUD	SCREENING_POP	f	SNP			G		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BTBR T<+> Itpr3/J	LG/J	NZW/LacJ	SM/J
rs27308407					SNP	C	G	G	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37550536	NES08896631	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156032715 () rs orientation: forward

Symbol	Name	Function Class
Rr568204	regulatory region 568204	1872 bp distal
Rr568205	regulatory region 568205	within coordinates
Rr568206	regulatory region 568206	703 bp proximal
Rr568207	regulatory region 568207	916 bp proximal