rs27324340 SNP Detail

Summary

• ID
  rs27324340
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:156556609 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTATCTTA GACTATATCT
  TCATTTGAAA ATGATCTACT GGCTCGAGAC TAAAACTGAC AGATTTATTT TCCAACTCAG
  CCATTTCTGG GCCCTTCCTA TTTCCCCTGA GTGTCCCTGA CAGGTTGGCT GTTTCTTTTG
  CATTTTCTCT TTAAGCTCTT ATCCAAAGGA GGCAGGCCTT GCCCAAGTCT ATCTGCACAC
  R
  GGAAGTCACT CTAGGTGGAT TTCCTTGGGA GTCCTGACCC ACGCAGAATC CAGGCTCCTT
  TTCCAATCCT CCTCTAAGAG TTTGCTCATC CTTTCTCTCC CTGCTTGGTC CTGGGGCCAA
  CGTGATATCT CTTGGTCGTT ACGCAGTCAC ACTCTACATT GTGTACCATC TCAGTGGGGG
  ACAACAGCAA ACACTTAGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss37548861	NES08905332	PERLEGEN	MM_PANEL2	f	SNP		A	G	G		G	G	G	G
ss148081001	ENSMUSSNP6725523	ENSEMBL	ENSEMBL_Sanger	f	SNP	G				G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs27324340					SNP	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37548861	NES08905332	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156556609 () rs orientation: forward

Symbol	Name	Function Class
4930405A21Rik	RIKEN cDNA 4930405A21 gene	within coordinates
Dlgap4	DLG associated protein 4	within coordinates