rs27324344 SNP Detail

Summary

• ID
  rs27324344
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:156555507 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTCATGCCT CGCTCACAGG GAATGCTAAG CTACCCAAGA
  TCCCCCTAAG CGGCTGTGAG ATAGGAGACA AGTCCTCGAG ATTTCCTGAG AAACGAACCT
  S
  GGACCTTGCC TGCTTCCTTC CTAGGAACGC TAGATTCATC TTCTTTAGCA GAAGCTGACT
  GACCTAGCTC AAACACGTTT TATTTCATTA TTCAATTTA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss37548865	NES08905344	PERLEGEN	MM_PANEL2	f	SNP	C		C	G	C	C		C		G	C	C	G
ss148080951	ENSMUSSNP1580379	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C				G
ss320581484	CHEV_2_156539323	CHEVERUD	SCREENING_POP	f	SNP									G					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs27324344					SNP	C	C	C	G	C	C	G	C	G	G	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37548865	NES08905344	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156555507 () rs orientation: forward

Symbol	Name	Function Class
4930405A21Rik	RIKEN cDNA 4930405A21 gene	952 bp downstream
Dlgap4	DLG associated protein 4	within coordinates