rs27329659 SNP Detail

Summary

• ID
  rs27329659
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:166048518 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGAGTACGA CAGACAGGCA GTCATCTCAG CAGAGCGTTC
  CAGACTCAGC TGCTCTGTGC CAAACCCAAG CATGGCCCTG CTCGGGACTC AGAAGTTGGT
  M
  TTTGGCTCTC AGCAGTTCTG GGATGGAGTC TGAGGTGGCA GGTGGCTAGC ATGTGGCTTC
  CAGGCATCCC AGACTCACCC TGGCAGCCTC CCAAGTGTGG                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	MOLF/EiJ	PWD/PhJ
ss37512079	NES08851279	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	MOLF/EiJ	PWD/PhJ
rs27329659					SNP	C	C	C	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37512079	NES08851279	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:166048518 () rs orientation: forward

Symbol	Name	Function Class
Gm11467	predicted gene 11467	632 bp downstream
Rr570174	regulatory region 570174	1953 bp distal
Rr570175	regulatory region 570175	within coordinates
Rr570176	regulatory region 570176	531 bp proximal