rs27352409 SNP Detail

Summary

• ID
  rs27352409
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:151633498 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCCAGGTG TTTGGGACAG
  CTGGCAAGGG AAGTGACCAG CGTTGTGTAG GGAGAGGGCA AGGCAGCAGC ATATGGAGCA
  CCTGAGCCAG GGAAAGAGGG TGCTAGAGAT GGTGGAGAGG GCATCCCAGC TGTGGGTCCC
  ACCTGGGACT TGCATCCTGG ATGTGGAGAA GGTGTGTGGG ACTGTATACA GGTGTACTAA
  K
  GTCTGGTTCT GACTACTGTT TGAAGGATGC CTTAGTAAGA GAGGGGAAGT CAGGGAAGGA
  TCAGGCCACA ACTCTTTGAG TGTCAGGTGG GAGCTCATAG AGTTGTGACT CGGGAGTAGC
  AGTGGCCACG GGAAAAACTG GAGGATACGC TGGAGGCAAT ATGGGCAGAA TGCACCTAAG
  GATTATCTGG AGCACCTGAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37564431	NES08916480	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27352409					SNP	T	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37564431	NES08916480	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:151633498 () rs orientation: forward

Symbol	Name	Function Class
Rr567201	regulatory region 567201	870 bp distal
Rr567202	regulatory region 567202	120 bp distal