rs27353702 SNP Detail

Summary

• ID
  rs27353702
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:151303029 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGAGAGAGA AAGAAAGAAA GAAAGAAAGA AAGAAAGAAA
  GAAAGAAAGA AAGAAAGAAA GAAAAGAAAG ACAAGCTCTG GAGTCAACCA GTGTGCAGAG
  M
  ACTGATACAG AACAGTACCA AATTCCTCAC AACACCAAGA GGATCTTCCA GATGGCACCT
  GCTGGCTGTG CCTCCTCAGG AAGAGACACA AGCTTGTTTA                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss37565521	NES08924492	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs27353702					SNP	A	A	A	A	A	A	A	A	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37565521	NES08924492	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:151303029 () rs orientation: forward

Symbol	Name	Function Class
Gm14146	predicted gene 14146	936 bp downstream
Gm14150	predicted gene 14150	800 bp downstream
Rr55801	regulatory region 55801	1628 bp distal
Rr55802	regulatory region 55802	1028 bp distal
Tssr691	transcription start site region 691	1942 bp downstream