rs27353703 SNP Detail

Summary

• ID
  rs27353703
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:151302292 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTATGTGG GTGAGGGCAT
  GGAGGAGGGT GAGTTCTCTG AGGCCCGTGA GGACATGACT GCCCTAGAGA AGGATTATGA
  GGAGGTTGGT GTGGATTCTG TGGAAGGCAA GGGGGAGGAA AAAGAAGAGG AATACTAAGT
  CCATTCCTTG AGCCCCTGTG TCGTCAAACT GCTCCAGTAT TAGTTGCAGG CACTGATGCC
  R
  TTTCCATTCT CTGATCATGT CTTCTCCATG TTGTACCTCT TAAGTCTTCC ATGATGTCTC
  AAAGTAAAAG CTTTAAGAAA AAAGAAAATA TCTAATAAGA AAGAAAGAAA GAAGAGAGAG
  AGAGAAAGAA AGAAAGAAAG AAAGGAAGGA AGGAAGGAAG GAAGGAAGGA AGGAAGAAAG
  GAAAGAAAGA AAGAAAGAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	WSB/EiJ
ss37565522	NES08924578	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	WSB/EiJ
rs27353703					SNP	A	A	A	A	A	A	G	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37565522	NES08924578	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:151302292 () rs orientation: forward

Symbol	Name	Function Class
Gm14146	predicted gene 14146	1673 bp downstream
Gm14150	predicted gene 14150	63 bp downstream
Rr55801	regulatory region 55801	891 bp distal
Rr55802	regulatory region 55802	291 bp distal
Tssr691	transcription start site region 691	1205 bp downstream
Tssr20717	transcription start site region 20717	1515 bp downstream