rs27391355 SNP Detail

Summary

• ID
  rs27391355
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:87786028 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTAT ACAATTCTTT TCTGCAGGGA
  S
  GTCAAGTCTG TCAGCTCTAC CAGAA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
ss37609977	NES09108188	PERLEGEN	MM_PANEL2	f	SNP	G		C	C	G	G		G	C	C	C		G	G	G
ss45233376	mCV25336269	ABI	CRAMUS_MOUSE	f	SNP		G	C				G		C
ss146890030	ENSMUSSNP6413685	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C						C
ss320383899	CHEV_2_87795841	CHEVERUD	SCREENING_POP	f	SNP												G				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
rs27391355					SNP	G	G	C	C	G	G	G	G	C	C	C	G	G	G	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37609977	NES09108188	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:87786028 () rs orientation: forward

Symbol	Name	Function Class
Rr373500	regulatory region 373500	838 bp upstream